Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_2307 | Not Available | Positive | 2297085 - 2297504 | 15013.6 |
| serine protease, s1-c subfamily, contains c-terminal pdz domain | SAMN04244553_2308 | Not Available | Positive | 2297515 - 2299077 | 53241.7 |
| sec-independent protein translocase protein tatb | SAMN04244553_2309 | Not Available | Positive | 2299111 - 2299527 | 15404.6 |
| hypothetical protein | SAMN04244553_2310 | Not Available | Positive | 2299653 - 2300510 | 30827.2 |
| hypothetical protein | SAMN04244553_2311 | Not Available | Positive | 2300766 - 2301005 | 8137.66 |
| glucosyl-3-phosphoglycerate synthase | SAMN04244553_2312 | Not Available | Negative | 2301102 - 2302040 | 33304.0 |
| dihydropteroate synthase | SAMN04244553_2313 | Not Available | Negative | 2302037 - 2303005 | 33750.2 |
| hypothetical protein | SAMN04244553_2314 | Not Available | Negative | 2303188 - 2303769 | 20735.8 |
| hypothetical protein | SAMN04244553_2315 | Not Available | Negative | 2303763 - 2304572 | 29385.9 |
| succinyldiaminopimelate desuccinylase | SAMN04244553_2316 | Not Available | Negative | 2304629 - 2305729 | 38905.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

