Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diviva domain-containing protein | SAMN04244553_2297 | Not Available | Positive | 2289743 - 2290189 | 15649.5 |
| dna-3-methyladenine glycosylase i | SAMN04244553_2298 | Not Available | Positive | 2290156 - 2290821 | 24321.9 |
| protein of unknown function | SAMN04244553_2299 | Not Available | Positive | 2290924 - 2291091 | 5678.9 |
| 23s rrna (guanine745-n1)-methyltransferase | SAMN04244553_2300 | Not Available | Positive | 2291111 - 2291935 | 28724.5 |
| starch synthase | SAMN04244553_2301 | Not Available | Negative | 2292022 - 2293260 | 44397.6 |
| glucose-1-phosphate adenylyltransferase | SAMN04244553_2302 | Not Available | Positive | 2293329 - 2294543 | 43447.4 |
| hypothetical protein | SAMN04244553_2303 | Not Available | Negative | 2294558 - 2294764 | 7314.7 |
| hypothetical protein | SAMN04244553_2304 | Not Available | Negative | 2294870 - 2295115 | 8537.41 |
| predicted o-methyltransferase yrrm | SAMN04244553_2305 | Not Available | Negative | 2295435 - 2296115 | 24057.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04244553_2306 | Not Available | Positive | 2296343 - 2297026 | 25448.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

