Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-adenosyl methyltransferase | SAMN04244553_0329 | Not Available | Positive | 132137 - 132925 | 28761.2 |
| hypothetical protein | SAMN04244553_0330 | Not Available | Positive | 132998 - 133723 | 27074.8 |
| transcriptional regulator, iclr family | SAMN04244553_0331 | Not Available | Negative | 133730 - 134512 | 28029.9 |
| histidine ammonia-lyase | SAMN04244553_0332 | Not Available | Positive | 134600 - 136165 | 53973.8 |
| urocanate hydratase | SAMN04244553_0333 | Not Available | Positive | 136168 - 137829 | 59369.5 |
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN04244553_0334 | Not Available | Negative | 137863 - 138975 | 38748.5 |
| helix-turn-helix domain-containing protein | SAMN04244553_0335 | Not Available | Negative | 139054 - 139905 | 31937.7 |
| hypothetical protein | SAMN04244553_0336 | Not Available | Negative | 139902 - 140420 | 20025.6 |
| hypothetical protein | SAMN04244553_0337 | Not Available | Negative | 140398 - 140730 | 11625.7 |
| hypothetical protein | SAMN04244553_0338 | Not Available | Positive | 140961 - 141230 | 9856.85 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

