Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_2287 | Not Available | Negative | 2279978 - 2280832 | 29888.3 |
| magnesium transporter | SAMN04244553_2288 | Not Available | Positive | 2280967 - 2281992 | 38223.9 |
| suppressor of fused protein (sufu) | SAMN04244553_2289 | Not Available | Negative | 2281994 - 2282563 | 19675.6 |
| hypothetical protein | SAMN04244553_2290 | Not Available | Negative | 2282577 - 2283068 | 17362.1 |
| citrate lyase subunit beta / citryl-coa lyase | SAMN04244553_2291 | Not Available | Negative | 2283081 - 2284037 | 34204.0 |
| mg/co/ni transporter mgte (contains cbs domain) | SAMN04244553_2292 | Not Available | Positive | 2284064 - 2285347 | 47020.5 |
| uncharacterized membrane protein | SAMN04244553_2293 | Not Available | Positive | 2285340 - 2285966 | 23326.9 |
| transglycosylase slt domain-containing protein | SAMN04244553_2294 | Not Available | Positive | 2286109 - 2287551 | 48513.3 |
| membrane-bound lytic murein transglycosylase b | SAMN04244553_2295 | Not Available | Positive | 2287673 - 2288512 | 28971.0 |
| atp-binding protein involved in chromosome partitioning | SAMN04244553_2296 | Not Available | Positive | 2288531 - 2289667 | 39986.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

