Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator padr-like family protein | SAMN04244553_2277 | Not Available | Negative | 2270112 - 2270789 | 25556.8 |
| osmoprotectant transport system substrate-binding protein | SAMN04244553_2278 | Not Available | Negative | 2271005 - 2271901 | 30784.7 |
| osmoprotectant transport system substrate-binding protein | SAMN04244553_2279 | Not Available | Positive | 2272028 - 2273011 | 33659.8 |
| osmoprotectant transport system atp-binding protein | SAMN04244553_2280 | Not Available | Positive | 2273038 - 2274207 | 41368.4 |
| osmoprotectant transport system permease protein | SAMN04244553_2281 | Not Available | Positive | 2274254 - 2274916 | 23686.8 |
| osmoprotectant transport system permease protein | SAMN04244553_2282 | Not Available | Positive | 2274913 - 2275617 | 24674.0 |
| cbs domain-containing protein | SAMN04244553_2283 | Not Available | Positive | 2275831 - 2276262 | 15917.3 |
| malate dehydrogenase (oxaloacetate-decarboxylating) | SAMN04244553_2284 | Not Available | Negative | 2276391 - 2277587 | 41134.3 |
| succinate dehydrogenase/fumarate reductase, flavoprotein subunit | SAMN04244553_2285 | Not Available | Negative | 2278025 - 2279683 | 57272.0 |
| hypothetical protein | SAMN04244553_2286 | Not Available | Negative | 2279715 - 2279981 | 9329.46 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

