Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-glucose 4-epimerase | SAMN04244553_2267 | Not Available | Positive | 2258043 - 2258948 | 31928.0 |
| transcriptional regulator, tetr family | SAMN04244553_2268 | Not Available | Negative | 2258937 - 2259581 | 23832.7 |
| predicted flavoprotein czco associated with the cation diffusion facilitator czcd | SAMN04244553_2269 | Not Available | Positive | 2259643 - 2261166 | 56334.0 |
| short-chain dehydrogenase | SAMN04244553_2270 | Not Available | Positive | 2261171 - 2262001 | 29714.9 |
| acetyl esterase/lipase | SAMN04244553_2271 | Not Available | Positive | 2262007 - 2262924 | 32521.3 |
| long-chain acyl-coa synthetase | SAMN04244553_2272 | Not Available | Positive | 2263051 - 2264844 | 64040.1 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04244553_2273 | Not Available | Negative | 2264906 - 2265769 | 32295.2 |
| conserved protein containing a zn-ribbon-like motif, possibly rna-binding | SAMN04244553_2274 | Not Available | Positive | 2265855 - 2266406 | 19896.8 |
| dmso/tmao reductase yedyz, molybdopterin-dependent catalytic subunit | SAMN04244553_2275 | Not Available | Positive | 2266448 - 2268223 | 62225.9 |
| drug resistance transporter, emrb/qaca subfamily | SAMN04244553_2276 | Not Available | Negative | 2268589 - 2270061 | 51157.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

