Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_2247 | Not Available | Positive | 2230030 - 2231319 | 43602.0 |
| espg family protein | SAMN04244553_2248 | Not Available | Positive | 2231301 - 2232452 | 39956.6 |
| carbonic anhydrase or acetyltransferase, isoleucine patch superfamily | SAMN04244553_2249 | Not Available | Positive | 2232480 - 2233007 | 18204.9 |
| putative phosphoribosyl transferase | SAMN04244553_2250 | Not Available | Negative | 2233159 - 2233785 | 22211.1 |
| predicted amidohydrolase | SAMN04244553_2251 | Not Available | Negative | 2233797 - 2234651 | 30220.2 |
| atp-dependent rna helicase csda | SAMN04244553_2252 | Not Available | Positive | 2234714 - 2236522 | 66170.9 |
| uncharacterized protein | SAMN04244553_2253 | Not Available | Positive | 2236633 - 2239965 | 119539.0 |
| d-serine deaminase, pyridoxal phosphate-dependent | SAMN04244553_2254 | Not Available | Negative | 2239979 - 2241157 | 41309.7 |
| hypothetical protein | SAMN04244553_2255 | Not Available | Negative | 2241206 - 2241685 | 17419.8 |
| protein-tyrosine phosphatase | SAMN04244553_2256 | Not Available | Positive | 2242096 - 2242842 | 27114.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

