Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_2237 | Not Available | Negative | 2217538 - 2218710 | 43179.4 |
| hypothetical protein | SAMN04244553_2238 | Not Available | Positive | 2218943 - 2219668 | 23766.1 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04244553_2239 | Not Available | Negative | 2220074 - 2221204 | 41974.6 |
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN04244553_2240 | Not Available | Positive | 2221268 - 2222224 | 34734.6 |
| binding-protein-dependent transport system inner membrane component | SAMN04244553_2241 | Not Available | Negative | 2222335 - 2224866 | 88136.2 |
| peptide/nickel transport system permease protein | SAMN04244553_2242 | Not Available | Negative | 2224907 - 2225881 | 33543.6 |
| peptide/nickel transport system substrate-binding protein | SAMN04244553_2243 | Not Available | Negative | 2225891 - 2227483 | 57966.3 |
| hypothetical protein | SAMN04244553_2244 | Not Available | Negative | 2227846 - 2228760 | 31486.5 |
| serine aminopeptidase, s33 | SAMN04244553_2245 | Not Available | Positive | 2228818 - 2229585 | 27483.0 |
| hypothetical protein | SAMN04244553_2246 | Not Available | Positive | 2229660 - 2230037 | 13049.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

