Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pimeloyl-acp methyl ester carboxylesterase | SAMN04244553_2227 | Not Available | Negative | 2209356 - 2210186 | 29455.7 |
| transcriptional regulator, tetr family | SAMN04244553_2228 | Not Available | Positive | 2210281 - 2210913 | 22687.0 |
| taurine dioxygenase | SAMN04244553_2229 | Not Available | Positive | 2211092 - 2212015 | 33706.4 |
| formyl-coa transferase | SAMN04244553_2230 | Not Available | Positive | 2212121 - 2213350 | 44228.1 |
| hypothetical protein | SAMN04244553_2231 | Not Available | Positive | 2213347 - 2213514 | 6322.65 |
| hydroxymethylglutaryl-coa lyase | SAMN04244553_2232 | Not Available | Positive | 2213511 - 2214440 | 32514.8 |
| fr47-like protein | SAMN04244553_2233 | Not Available | Negative | 2214425 - 2215261 | 30201.1 |
| hypothetical protein | SAMN04244553_2234 | Not Available | Negative | 2215280 - 2215630 | 11722.3 |
| hypothetical protein | SAMN04244553_2235 | Not Available | Positive | 2215858 - 2216349 | 16821.4 |
| hypothetical protein | SAMN04244553_2236 | Not Available | Negative | 2216401 - 2217528 | 39851.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

