Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| wd40 repeat | SAMN04244553_2206 | Not Available | Negative | 2181625 - 2185809 | 151729.0 |
| putative abc transport system permease protein | SAMN04244553_2207 | Not Available | Negative | 2185998 - 2188547 | 88239.4 |
| putative abc transport system atp-binding protein | SAMN04244553_2208 | Not Available | Negative | 2188594 - 2189370 | 27722.8 |
| hypothetical protein | SAMN04244553_2209 | Not Available | Negative | 2189510 - 2189917 | 14718.0 |
| transcriptional regulator, tetr family | SAMN04244553_2210 | Not Available | Negative | 2190133 - 2190690 | 19991.0 |
| 3-oxo-5alpha-steroid 4-dehydrogenase | SAMN04244553_2211 | Not Available | Negative | 2190736 - 2192205 | 51849.5 |
| 4-carboxymuconolactone decarboxylase | SAMN04244553_2212 | Not Available | Negative | 2192234 - 2192647 | 14821.7 |
| 3-hydroxyisobutyrate dehydrogenase | SAMN04244553_2213 | Not Available | Negative | 2192644 - 2193507 | 29646.9 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04244553_2214 | Not Available | Negative | 2193504 - 2194256 | 26241.6 |
| aldehyde dehydrogenase (nad+) | SAMN04244553_2215 | Not Available | Negative | 2194305 - 2195771 | 51223.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

