Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkane 1-monooxygenase | SAMN04244553_2166 | Not Available | Negative | 2136536 - 2137771 | 46954.6 |
| 8-oxo-dgtp pyrophosphatase mutt, nudix family | SAMN04244553_2167 | Not Available | Negative | 2137944 - 2138462 | 18532.0 |
| coenzyme f420-0:l-glutamate ligase / coenzyme f420-1:gamma-l-glutamate ligase | SAMN04244553_2168 | Not Available | Negative | 2138500 - 2139843 | 47538.9 |
| lppg:fo 2-phospho-l-lactate transferase | SAMN04244553_2169 | Not Available | Negative | 2139840 - 2140973 | 40663.8 |
| whib family transcriptional regulator, redox-sensing transcriptional regulator | SAMN04244553_2170 | Not Available | Positive | 2141184 - 2141561 | 13805.1 |
| predicted zn-dependent protease, minimal metalloprotease (mmp)-like domain | SAMN04244553_2171 | Not Available | Positive | 2141699 - 2142106 | 15195.2 |
| protein of unknown function | SAMN04244553_2172 | Not Available | Positive | 2142206 - 2142586 | 13950.3 |
| phosphomannomutase | SAMN04244553_2173 | Not Available | Positive | 2142949 - 2144325 | 48820.7 |
| hypothetical protein | SAMN04244553_2174 | Not Available | Positive | 2144525 - 2145748 | 41203.9 |
| mannose-6-phosphate isomerase, type 1 | SAMN04244553_2175 | Not Available | Positive | 2145748 - 2146968 | 43304.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

