Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| linoleoyl-coa desaturase | SAMN04244553_2146 | Not Available | Positive | 2116113 - 2117387 | 47879.2 |
| cob(ii)yrinic acid a,c-diamide reductase | SAMN04244553_2147 | Not Available | Positive | 2117453 - 2118145 | 25240.7 |
| hypothetical protein | SAMN04244553_2148 | Not Available | Positive | 2118493 - 2119338 | 30800.0 |
| hypothetical protein | SAMN04244553_2149 | Not Available | Positive | 2119851 - 2120639 | 30021.5 |
| 3-ketoacyl-coa thiolase | SAMN04244553_2150 | Not Available | Negative | 2120722 - 2122014 | 44925.8 |
| helix-turn-helix | SAMN04244553_2151 | Not Available | Positive | 2122370 - 2123074 | 25448.9 |
| hypothetical protein | SAMN04244553_2152 | Not Available | Positive | 2123085 - 2123519 | 15554.2 |
| protein of unknown function | SAMN04244553_2153 | Not Available | Positive | 2123623 - 2124147 | 19415.0 |
| hypothetical protein | SAMN04244553_2154 | Not Available | Positive | 2124144 - 2125313 | 42354.1 |
| ribosomal subunit interface protein | SAMN04244553_2155 | Not Available | Negative | 2125300 - 2126040 | 27782.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

