Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component sensor histidine kinase, contains hiska and hatpase domains | SAMN04244553_2126 | Not Available | Negative | 2094331 - 2095845 | 54275.9 |
| biotin-requiring enzyme | SAMN04244553_2127 | Not Available | Negative | 2095865 - 2096080 | 7478.12 |
| hypothetical protein | SAMN04244553_2128 | Not Available | Positive | 2096257 - 2096331 | 2676.28 |
| mycothiol system anti-sigma-r factor | SAMN04244553_2129 | Not Available | Negative | 2096436 - 2096717 | 10612.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04244553_2130 | Not Available | Negative | 2096714 - 2097496 | 28994.1 |
| cys-trna(pro)/cys-trna(cys) deacylase | SAMN04244553_2131 | Not Available | Positive | 2097688 - 2098179 | 16597.1 |
| hypothetical protein | SAMN04244553_2132 | Not Available | Positive | 2098432 - 2098791 | 12275.2 |
| putative sos response-associated peptidase yedk | SAMN04244553_2133 | Not Available | Negative | 2098816 - 2099619 | 29348.7 |
| acyl-coa reductase | SAMN04244553_2134 | Not Available | Positive | 2099791 - 2101299 | 53103.6 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | SAMN04244553_2135 | Not Available | Positive | 2101408 - 2102703 | 45143.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

