Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pp_01832 | SAMN04244553_2116 | Not Available | Negative | 2083931 - 2084623 | Not Available |
| polyhydroxyalkanoate synthase | SAMN04244553_2117 | Not Available | Negative | 2084758 - 2085807 | 36899.2 |
| superfamily ii dna and rna helicase | SAMN04244553_2118 | Not Available | Positive | 2086386 - 2088677 | 80654.1 |
| hypothetical protein | SAMN04244553_2119 | Not Available | Positive | 2088705 - 2089940 | 42682.8 |
| probable phosphoglycerate mutase | SAMN04244553_2120 | Not Available | Positive | 2090033 - 2090641 | 22369.3 |
| l-amino acid n-acyltransferase ynca | SAMN04244553_2121 | Not Available | Positive | 2090638 - 2091123 | 17700.0 |
| endonuclease v | SAMN04244553_2122 | Not Available | Positive | 2091141 - 2091830 | 23940.7 |
| hypothetical protein | SAMN04244553_2123 | Not Available | Negative | 2091844 - 2092266 | 14171.5 |
| diacylglycerol kinase family enzyme | SAMN04244553_2124 | Not Available | Positive | 2092352 - 2093299 | 34250.8 |
| transcription factor whib | SAMN04244553_2125 | Not Available | Positive | 2093548 - 2093802 | 9330.14 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

