Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_2106 | Not Available | Negative | 2073404 - 2074420 | 38066.3 |
| cobq/cobb/mind/para nucleotide binding domain-containing protein | SAMN04244553_2107 | Not Available | Negative | 2074454 - 2075371 | 32808.2 |
| hypothetical protein | SAMN04244553_2108 | Not Available | Negative | 2075375 - 2077234 | 69100.3 |
| tigr02569 family protein | SAMN04244553_2109 | Not Available | Negative | 2077512 - 2078363 | 31061.3 |
| adenylyltransferase and sulfurtransferase | SAMN04244553_2110 | Not Available | Negative | 2078527 - 2079711 | 42617.1 |
| protein of unknown function | SAMN04244553_2111 | Not Available | Negative | 2079806 - 2080999 | 42372.4 |
| transcriptional regulator, tetr family | SAMN04244553_2112 | Not Available | Positive | 2081184 - 2081873 | 25706.5 |
| protein of unknown function | SAMN04244553_2113 | Not Available | Negative | 2081969 - 2082196 | 7754.28 |
| polyisoprenoid-binding protein ycei | SAMN04244553_2114 | Not Available | Negative | 2082352 - 2082900 | 19355.7 |
| helix-turn-helix domain-containing protein | SAMN04244553_2115 | Not Available | Positive | 2082994 - 2083842 | 31292.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

