Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen-iii synthase | SAMN04244553_2096 | Not Available | Negative | 2060920 - 2062164 | 43673.8 |
| nitrite reductase (nadh) small subunit | SAMN04244553_2097 | Not Available | Negative | 2062171 - 2062566 | 13471.1 |
| assimilatory nitrite reductase (nad(p)h) large subunit precursor | SAMN04244553_2098 | Not Available | Negative | 2062631 - 2065171 | 89032.1 |
| mfs transporter, nnp family, nitrate/nitrite transporter | SAMN04244553_2099 | Not Available | Negative | 2065200 - 2066654 | 50532.5 |
| mfs transporter, cp family, cyanate transporter | SAMN04244553_2100 | Not Available | Negative | 2066919 - 2068202 | 44785.1 |
| transcriptional regulator, gntr family | SAMN04244553_2101 | Not Available | Positive | 2068244 - 2068915 | 24517.7 |
| mfs transporter, nnp family, nitrate/nitrite transporter | SAMN04244553_2102 | Not Available | Positive | 2069175 - 2070653 | 52052.7 |
| ribosomal-protein-alanine n-acetyltransferase | SAMN04244553_2103 | Not Available | Positive | 2070915 - 2071451 | 19520.2 |
| hypothetical protein | SAMN04244553_2104 | Not Available | Positive | 2071518 - 2072372 | 31649.1 |
| hypothetical protein | SAMN04244553_2105 | Not Available | Negative | 2072389 - 2073390 | 35754.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

