Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_2025 | Not Available | Negative | 1977357 - 1977626 | 9361.36 |
| solute:na+ symporter, sss family | SAMN04244553_2026 | Not Available | Negative | 1977639 - 1979402 | 62836.3 |
| galactokinase | SAMN04244553_2027 | Not Available | Negative | 1979648 - 1980757 | 38611.9 |
| arginine decarboxylase | SAMN04244553_2028 | Not Available | Positive | 1980930 - 1981514 | 20583.6 |
| hypothetical protein | SAMN04244553_2029 | Not Available | Positive | 1981520 - 1982089 | 21109.8 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN04244553_2030 | Not Available | Positive | 1982089 - 1983642 | 55376.2 |
| hypothetical protein | SAMN04244553_2031 | Not Available | Negative | 1983735 - 1984490 | 25561.3 |
| transcriptional regulator, tetr family | SAMN04244553_2032 | Not Available | Negative | 1984701 - 1985339 | 23547.1 |
| predicted flavoprotein czco associated with the cation diffusion facilitator czcd | SAMN04244553_2033 | Not Available | Positive | 1985520 - 1986887 | 51303.1 |
| cubico group peptidase, beta-lactamase class c family | SAMN04244553_2034 | Not Available | Positive | 1986893 - 1988044 | 41243.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

