Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_2014 | Not Available | Positive | 1965809 - 1966450 | 22549.8 |
| acyl-[acyl-carrier-protein] desaturase | SAMN04244553_2015 | Not Available | Negative | 1966686 - 1967666 | 37056.0 |
| fatty-acyl-coa synthase | SAMN04244553_2017 | Not Available | Positive | 1967908 - 1969527 | 58639.8 |
| fatty-acyl-coa synthase | SAMN04244553_2018 | Not Available | Positive | 1969739 - 1971394 | 59426.6 |
| stress response protein scp2 | SAMN04244553_2019 | Not Available | Positive | 1971515 - 1972924 | 49266.1 |
| hypothetical protein | SAMN04244553_2020 | Not Available | Positive | 1973021 - 1973584 | 18996.4 |
| uncharacterized iron-regulated membrane protein | SAMN04244553_2021 | Not Available | Positive | 1973787 - 1975259 | 52724.8 |
| hypothetical protein | SAMN04244553_2022 | Not Available | Positive | 1975393 - 1976103 | 23548.5 |
| protein of unknown function | SAMN04244553_2023 | Not Available | Positive | 1976250 - 1976720 | 16425.0 |
| polyketide cyclase / dehydrase and lipid transport | SAMN04244553_2024 | Not Available | Positive | 1976738 - 1977355 | 22912.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

