Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacterial peptide chain release factor 2 (brf-2) | SAMN04244553_2004 | Not Available | Negative | 1956043 - 1957161 | 41987.1 |
| helix-turn-helix domain-containing protein | SAMN04244553_2005 | Not Available | Negative | 1957227 - 1958183 | 33997.6 |
| nad(p)h-dependent fmn reductase | SAMN04244553_2006 | Not Available | Positive | 1958226 - 1958816 | 21237.2 |
| inositol-phosphate phosphatase | SAMN04244553_2007 | Not Available | Positive | 1958836 - 1959621 | 27677.5 |
| ribosomal protein s18 acetylase rimi | SAMN04244553_2008 | Not Available | Negative | 1959690 - 1960217 | 19507.4 |
| smp-30/gluconolaconase/lre-like region-containing protein | SAMN04244553_2009 | Not Available | Negative | 1960265 - 1961218 | 33095.5 |
| hypothetical protein | SAMN04244553_2010 | Not Available | Negative | 1961377 - 1961679 | 9007.56 |
| hypothetical protein | SAMN04244553_2011 | Not Available | Positive | 1961973 - 1963364 | 49300.0 |
| acyl-coa dehydrogenase | SAMN04244553_2012 | Not Available | Positive | 1963399 - 1964622 | 43390.9 |
| hypothetical protein | SAMN04244553_2013 | Not Available | Negative | 1964955 - 1965392 | 15456.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

