Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase (gnat) family protein | SAMN04244553_1994 | Not Available | Positive | 1945554 - 1945952 | 14996.8 |
| abc-type branched-chain amino acid transport system, substrate-binding protein | SAMN04244553_1995 | Not Available | Positive | 1946256 - 1947560 | 45986.1 |
| abc-type branched-chain amino acid transport system, substrate-binding protein | SAMN04244553_1996 | Not Available | Positive | 1947611 - 1948909 | 45541.7 |
| ssra-binding protein | SAMN04244553_1997 | Not Available | Negative | 1948982 - 1949455 | 18032.9 |
| hypothetical protein | SAMN04244553_1998 | Not Available | Negative | 1949523 - 1949759 | 8018.76 |
| calcineurin-like phosphoesterase | SAMN04244553_1999 | Not Available | Negative | 1949924 - 1951006 | 38196.0 |
| atp-dependent dna helicase recq | SAMN04244553_2000 | Not Available | Negative | 1951116 - 1953011 | 69024.7 |
| cell division protein ftsx | SAMN04244553_2001 | Not Available | Negative | 1953162 - 1954064 | 32951.4 |
| cell division atp-binding protein ftse | SAMN04244553_2002 | Not Available | Negative | 1954064 - 1954801 | 27644.7 |
| small conductance mechanosensitive channel | SAMN04244553_2003 | Not Available | Negative | 1955042 - 1955899 | 30721.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

