Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_1970 | Not Available | Negative | 1919653 - 1919946 | 10058.4 |
| lysophospholipase l1 | SAMN04244553_1971 | Not Available | Positive | 1920128 - 1920808 | 24977.5 |
| transcriptional regulator, tetr family | SAMN04244553_1972 | Not Available | Positive | 1920805 - 1921452 | 23395.2 |
| hypothetical protein | SAMN04244553_1973 | Not Available | Negative | 1921392 - 1922549 | 41107.6 |
| amidase | SAMN04244553_1974 | Not Available | Positive | 1922686 - 1924122 | 50737.4 |
| cutinase | SAMN04244553_1975 | Not Available | Positive | 1924402 - 1925295 | 30821.5 |
| alpha-1,2-mannosyltransferase | SAMN04244553_1976 | Not Available | Negative | 1925420 - 1926670 | 45409.4 |
| kynurenine formamidase | SAMN04244553_1978 | Not Available | Positive | 1927738 - 1928553 | 27845.2 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN04244553_1979 | Not Available | Negative | 1928606 - 1930171 | 56411.0 |
| ybab/ebfc dna-binding family protein | SAMN04244553_1980 | Not Available | Positive | 1930640 - 1931266 | 22371.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

