Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-gulonolactone oxidase | SAMN04244553_1960 | Not Available | Positive | 1911234 - 1912532 | 48250.9 |
| nad-dependent deacetylase | SAMN04244553_1961 | Not Available | Negative | 1912533 - 1913288 | 26841.0 |
| uncharacterized conserved protein, duf2236 family | SAMN04244553_1962 | Not Available | Positive | 1913462 - 1914370 | 34147.2 |
| arsenate reductase | SAMN04244553_1963 | Not Available | Positive | 1914770 - 1915183 | 14518.6 |
| catechol 2,3-dioxygenase | SAMN04244553_1964 | Not Available | Positive | 1915184 - 1915627 | 15983.6 |
| arac-type dna-binding protein | SAMN04244553_1965 | Not Available | Negative | 1915910 - 1916659 | 26607.9 |
| protein of unknown function | SAMN04244553_1966 | Not Available | Positive | 1916827 - 1917300 | 16595.7 |
| hypothetical protein | SAMN04244553_1967 | Not Available | Negative | 1917350 - 1917838 | 16428.2 |
| threonine dehydratase | SAMN04244553_1968 | Not Available | Positive | 1918046 - 1919005 | 32680.8 |
| ahpc/tsa family protein | SAMN04244553_1969 | Not Available | Positive | 1919089 - 1919634 | 19361.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

