Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04244553_1950 | Not Available | Positive | 1900163 - 1901647 | 53711.9 |
| thioredoxin | SAMN04244553_1951 | Not Available | Negative | 1902056 - 1902757 | 24559.8 |
| predicted arabinose efflux permease, mfs family | SAMN04244553_1952 | Not Available | Negative | 1903019 - 1904389 | 46740.1 |
| phosphoglucomutase | SAMN04244553_1953 | Not Available | Negative | 1904379 - 1906073 | 60765.6 |
| crcb protein | SAMN04244553_1954 | Not Available | Negative | 1906070 - 1906432 | 12251.1 |
| hypothetical protein | SAMN04244553_1955 | Not Available | Negative | 1906429 - 1906791 | 13171.6 |
| crcb protein | SAMN04244553_1956 | Not Available | Negative | 1906856 - 1907299 | 15472.1 |
| secretory lipase | SAMN04244553_1957 | Not Available | Positive | 1907490 - 1908758 | 43718.4 |
| drug resistance transporter, emrb/qaca subfamily | SAMN04244553_1958 | Not Available | Negative | 1908890 - 1910383 | 51323.1 |
| transcriptional regulator, tetr family | SAMN04244553_1959 | Not Available | Positive | 1910503 - 1911177 | 24937.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

