Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_1940 | Not Available | Positive | 1893577 - 1893891 | 11292.5 |
| hypothetical protein | SAMN04244553_1941 | Not Available | Positive | 1893888 - 1894214 | 11882.8 |
| hypothetical protein | SAMN04244553_1942 | Not Available | Positive | 1894211 - 1894405 | 7119.44 |
| dna (cytosine-5)-methyltransferase 1 | SAMN04244553_1943 | Not Available | Positive | 1894405 - 1895931 | 56122.6 |
| hypothetical protein | SAMN04244553_1944 | Not Available | Positive | 1895928 - 1896086 | 5664.68 |
| dna segregation atpase ftsk/spoiiie, s-dna-t family | SAMN04244553_1945 | Not Available | Positive | 1896083 - 1896712 | 23023.0 |
| hypothetical protein | SAMN04244553_1946 | Not Available | Positive | 1896712 - 1898424 | 63677.3 |
| dna binding domain-containing protein, excisionase family | SAMN04244553_1947 | Not Available | Positive | 1898438 - 1898617 | 6838.32 |
| site-specific recombinase xerd | SAMN04244553_1948 | Not Available | Positive | 1898617 - 1899870 | 47245.4 |
| Trna-ala | Not Available | Not Available | Positive | 1899968 - 1900040 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

