Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| riboflavin synthase alpha chain | SAMN04244553_1902 | Not Available | Negative | 1828702 - 1829325 | 21700.7 |
| hypothetical protein | SAMN04244553_1903 | Not Available | Positive | 1829922 - 1830392 | 17226.8 |
| ribulose-5-phosphate 3-epimerase | SAMN04244553_1904 | Not Available | Negative | 1830453 - 1831106 | 23306.7 |
| serine/threonine-protein kinase rsbw | SAMN04244553_1905 | Not Available | Positive | 1831213 - 1831653 | 15634.6 |
| rna polymerase sigma-b factor | SAMN04244553_1906 | Not Available | Positive | 1831653 - 1832513 | 31618.0 |
| hypothetical protein | SAMN04244553_1907 | Not Available | Negative | 1832518 - 1832973 | 16761.0 |
| 16s rrna (cytosine967-c5)-methyltransferase | SAMN04244553_1908 | Not Available | Negative | 1833314 - 1835515 | 77652.3 |
| methionyl-trna formyltransferase | SAMN04244553_1909 | Not Available | Negative | 1835512 - 1836435 | 32800.6 |
| peptide deformylase | SAMN04244553_1910 | Not Available | Negative | 1836435 - 1836992 | 20259.0 |
| saccharopine dehydrogenase nadp binding domain-containing protein | SAMN04244553_1912 | Not Available | Negative | 1837652 - 1838380 | 25553.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

