Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3',5'-cyclic amp phosphodiesterase cpda | SAMN04244553_1881 | Not Available | Positive | 1807171 - 1808019 | 29896.8 |
| multiple sugar transport system permease protein | SAMN04244553_1882 | Not Available | Positive | 1808024 - 1808971 | 34056.8 |
| abc-type glycerol-3-phosphate transport system, permease component | SAMN04244553_1883 | Not Available | Positive | 1808964 - 1809773 | 29456.9 |
| dna-binding transcriptional regulator, lysr family | SAMN04244553_1884 | Not Available | Negative | 1809775 - 1810689 | 33042.8 |
| preprotein translocase subunit secg | SAMN04244553_1885 | Not Available | Negative | 1810792 - 1811049 | 9072.68 |
| predicted arabinose efflux permease, mfs family | SAMN04244553_1886 | Not Available | Negative | 1811083 - 1812693 | 57015.4 |
| heat shock protein hslj | SAMN04244553_1887 | Not Available | Positive | 1812801 - 1813592 | 27360.6 |
| triosephosphate isomerase | SAMN04244553_1888 | Not Available | Negative | 1813715 - 1814500 | 27485.2 |
| phosphoglycerate kinase | SAMN04244553_1889 | Not Available | Negative | 1814504 - 1815718 | 42026.2 |
| glyceraldehyde-3-phosphate dehydrogenase (nad+) | SAMN04244553_1890 | Not Available | Negative | 1815724 - 1816743 | 35839.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

