Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-oxoisovalerate dehydrogenase e1 component | SAMN04244553_1871 | Not Available | Positive | 1796012 - 1798348 | 82408.0 |
| hypothetical protein | SAMN04244553_1872 | Not Available | Positive | 1798492 - 1798962 | 17496.9 |
| hypothetical protein | SAMN04244553_1873 | Not Available | Negative | 1799005 - 1799556 | 19840.8 |
| protein of unknown function | SAMN04244553_1874 | Not Available | Positive | 1799774 - 1800595 | 29015.6 |
| hypothetical protein | SAMN04244553_1875 | Not Available | Positive | 1800579 - 1801784 | 38306.9 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04244553_1876 | Not Available | Negative | 1801798 - 1802787 | 36542.9 |
| short chain dehydrogenase | SAMN04244553_1877 | Not Available | Positive | 1802842 - 1803690 | 29954.4 |
| hypothetical protein | SAMN04244553_1878 | Not Available | Negative | 1803765 - 1804454 | 22948.6 |
| multiple sugar transport system atp-binding protein | SAMN04244553_1879 | Not Available | Positive | 1804641 - 1805768 | 40521.1 |
| multiple sugar transport system substrate-binding protein | SAMN04244553_1880 | Not Available | Positive | 1805801 - 1807174 | 49254.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

