Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-methionine transport system substrate-binding protein | SAMN04244553_1841 | Not Available | Positive | 1766159 - 1767031 | 31512.3 |
| d-methionine transport system atp-binding protein | SAMN04244553_1842 | Not Available | Positive | 1767028 - 1768047 | 36594.1 |
| d-methionine transport system permease protein | SAMN04244553_1843 | Not Available | Positive | 1768050 - 1768712 | 23232.4 |
| protein n-acetyltransferase, rimj/riml family | SAMN04244553_1844 | Not Available | Negative | 1768716 - 1769225 | 17676.1 |
| protein of unknown function | SAMN04244553_1845 | Not Available | Negative | 1769301 - 1769744 | 14670.2 |
| protein of unknown function | SAMN04244553_1846 | Not Available | Negative | 1769933 - 1770352 | 13831.3 |
| protein of unknown function | SAMN04244553_1847 | Not Available | Negative | 1770489 - 1770914 | 13798.2 |
| metal-sulfur cluster biosynthetic enzyme | SAMN04244553_1848 | Not Available | Negative | 1771092 - 1771460 | 13565.0 |
| nitrogen fixation protein nifu | SAMN04244553_1849 | Not Available | Negative | 1771453 - 1771950 | 18111.5 |
| cysteine desulfurase | SAMN04244553_1850 | Not Available | Negative | 1771954 - 1773207 | 44698.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

