Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-polyprenyl-6-methoxyphenol hydroxylase | SAMN04244553_1830 | Not Available | Positive | 1755036 - 1756259 | 44037.1 |
| broad specificity phosphatase phoe | SAMN04244553_1831 | Not Available | Positive | 1756561 - 1757307 | 26114.7 |
| transcriptional regulator, arsr family | SAMN04244553_1832 | Not Available | Positive | 1757622 - 1757957 | 12950.5 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN04244553_1833 | Not Available | Positive | 1757954 - 1758484 | 19757.4 |
| acyl-coa oxidase | SAMN04244553_1834 | Not Available | Negative | 1758573 - 1760543 | 70531.4 |
| cytochrome p450 | SAMN04244553_1835 | Not Available | Negative | 1760568 - 1761827 | 45369.4 |
| cytochrome p450 | SAMN04244553_1836 | Not Available | Negative | 1761839 - 1763005 | 41400.2 |
| hypothetical protein | SAMN04244553_1838 | Not Available | Positive | 1763828 - 1764073 | 8485.54 |
| hypothetical protein | SAMN04244553_1839 | Not Available | Positive | 1764317 - 1764961 | 21381.4 |
| regulatory protein, luxr family | SAMN04244553_1840 | Not Available | Negative | 1765036 - 1765725 | 25471.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

