Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_1810 | Not Available | Positive | 1737617 - 1738963 | 49774.2 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04244553_1811 | Not Available | Positive | 1738960 - 1739868 | 32605.3 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN04244553_1812 | Not Available | Positive | 1739852 - 1740727 | 30863.7 |
| predicted flavoprotein czco associated with the cation diffusion facilitator czcd | SAMN04244553_1813 | Not Available | Positive | 1740724 - 1742217 | 54931.8 |
| transcriptional regulator, tetr family | SAMN04244553_1814 | Not Available | Positive | 1742228 - 1742863 | 23565.6 |
| s-formylglutathione hydrolase frmb | SAMN04244553_1815 | Not Available | Positive | 1743264 - 1744205 | 34221.1 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04244553_1816 | Not Available | Positive | 1744390 - 1745160 | 26760.9 |
| flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase ssud and methylene tetrahydromethanopterin reductase) | SAMN04244553_1817 | Not Available | Negative | 1745262 - 1746110 | 30181.3 |
| hypothetical protein | SAMN04244553_1818 | Not Available | Negative | 1746270 - 1746836 | 20706.3 |
| alpha/beta hydrolase family protein | SAMN04244553_1819 | Not Available | Negative | 1746877 - 1747599 | 24946.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

