Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formylglycine-generating enzyme, required for sulfatase activity, contains sumf1/fge domain | SAMN04244553_1800 | Not Available | Positive | 1727994 - 1728935 | 33886.9 |
| sap, sulfolipid-1-addressing protein | SAMN04244553_1801 | Not Available | Negative | 1729013 - 1729672 | 21734.2 |
| predicted purr-regulated permease perm | SAMN04244553_1802 | Not Available | Negative | 1729733 - 1730881 | 40598.6 |
| luciferase-like monooxygenase | SAMN04244553_1803 | Not Available | Positive | 1731039 - 1731842 | 29549.3 |
| fmn-dependent oxidoreductase, nitrilotriacetate monooxygenase family | SAMN04244553_1804 | Not Available | Positive | 1731929 - 1733221 | 46135.8 |
| rna polymerase sigma factor, sigma-70 family | SAMN04244553_1805 | Not Available | Negative | 1733249 - 1734526 | 45664.8 |
| uncharacterized conserved protein | SAMN04244553_1806 | Not Available | Negative | 1734542 - 1734961 | 15664.7 |
| serine protease inhibitor | SAMN04244553_1807 | Not Available | Positive | 1735228 - 1736427 | 42420.8 |
| hypothetical protein | SAMN04244553_1808 | Not Available | Negative | 1736434 - 1736754 | 11672.1 |
| uncharacterized membrane protein ykoi | SAMN04244553_1809 | Not Available | Positive | 1736933 - 1737532 | 20566.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

