Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase ssud and methylene tetrahydromethanopterin reductase) | SAMN04244553_1776 | Not Available | Negative | 1703782 - 1704588 | 29098.0 |
| hypothetical protein | SAMN04244553_1777 | Not Available | Positive | 1704664 - 1704804 | 4989.23 |
| hypothetical protein | SAMN04244553_1778 | Not Available | Positive | 1704840 - 1705082 | 8707.2 |
| hypothetical protein | SAMN04244553_1779 | Not Available | Negative | 1705413 - 1706093 | 25481.6 |
| mhyt domain-containing protein, no-binding membrane sensor | SAMN04244553_1780 | Not Available | Positive | 1706249 - 1707211 | 33686.8 |
| condensation domain-containing protein | SAMN04244553_1781 | Not Available | Negative | 1707612 - 1709378 | 64601.2 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04244553_1782 | Not Available | Positive | 1709438 - 1710217 | 27993.5 |
| deazaflavin-dependent oxidoreductase, nitroreductase family | SAMN04244553_1783 | Not Available | Negative | 1710281 - 1710793 | 18937.8 |
| hypothetical protein | SAMN04244553_1784 | Not Available | Negative | 1710887 - 1711060 | 6557.9 |
| 8-oxo-dgtp diphosphatase | SAMN04244553_1785 | Not Available | Negative | 1711766 - 1712194 | 15901.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

