Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-polyprenyl-6-methoxyphenol hydroxylase | SAMN04244553_1766 | Not Available | Positive | 1692604 - 1694250 | 58353.0 |
| kynurenine formamidase | SAMN04244553_1767 | Not Available | Positive | 1694252 - 1695202 | 33669.2 |
| putative drug exporter of the rnd superfamily | SAMN04244553_1768 | Not Available | Positive | 1695301 - 1697541 | 79672.7 |
| deazaflavin-dependent oxidoreductase, nitroreductase family | SAMN04244553_1769 | Not Available | Positive | 1697610 - 1698056 | 16655.9 |
| drug resistance transporter, emrb/qaca subfamily | SAMN04244553_1770 | Not Available | Positive | 1698053 - 1699624 | 53434.6 |
| mspa protein | SAMN04244553_1771 | Not Available | Positive | 1699652 - 1700323 | 22737.9 |
| hypothetical protein | SAMN04244553_1772 | Not Available | Negative | 1700353 - 1700976 | 21894.6 |
| d-alanyl-d-alanine carboxypeptidase | SAMN04244553_1773 | Not Available | Negative | 1701175 - 1702296 | 39865.0 |
| hypothetical protein | SAMN04244553_1774 | Not Available | Positive | 1702708 - 1703058 | 11724.9 |
| hypothetical protein | SAMN04244553_1775 | Not Available | Positive | 1703166 - 1703753 | 19584.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

