Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine synthase | SAMN04244553_1756 | Not Available | Positive | 1675351 - 1676919 | 56637.1 |
| ribosomal protein s18 acetylase rimi | SAMN04244553_1757 | Not Available | Positive | 1676967 - 1677521 | 19861.6 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN04244553_1758 | Not Available | Positive | 1677935 - 1678681 | 26887.2 |
| merr hth family regulatory protein | SAMN04244553_1759 | Not Available | Positive | 1678841 - 1679479 | 23085.7 |
| putative hydrolase of the had superfamily | SAMN04244553_1760 | Not Available | Negative | 1679449 - 1680123 | 24412.1 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | SAMN04244553_1761 | Not Available | Positive | 1680393 - 1682120 | 61459.1 |
| phosphopantetheine attachment site | SAMN04244553_1762 | Not Available | Positive | 1682117 - 1687720 | 195591.0 |
| acyl transferase domain-containing protein | SAMN04244553_1763 | Not Available | Positive | 1687717 - 1690782 | 107596.0 |
| surfactin synthase thioesterase subunit | SAMN04244553_1764 | Not Available | Positive | 1690779 - 1691594 | 29854.8 |
| a-factor biosynthesis hotdog domain-containing protein | SAMN04244553_1765 | Not Available | Positive | 1691591 - 1692607 | 37130.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

