Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_1703 | Not Available | Positive | 1618474 - 1618863 | 14042.7 |
| hypothetical protein | SAMN04244553_1704 | Not Available | Negative | 1619103 - 1619744 | 22086.2 |
| peptide-methionine (s)-s-oxide reductase | SAMN04244553_1705 | Not Available | Negative | 1619907 - 1620422 | 19683.9 |
| hypothetical protein | SAMN04244553_1706 | Not Available | Negative | 1620535 - 1621239 | 21826.8 |
| acyl-[acyl-carrier-protein] desaturase | SAMN04244553_1707 | Not Available | Positive | 1621602 - 1622543 | 35733.6 |
| mannose-6-phosphate isomerase | SAMN04244553_1710 | Not Available | Positive | 1623104 - 1623448 | 12936.9 |
| lao/ao transport system kinase | SAMN04244553_1711 | Not Available | Negative | 1623481 - 1624524 | 37048.5 |
| heterodimeric methylmalonyl-coa mutase large subunit precursor | SAMN04244553_1712 | Not Available | Negative | 1624521 - 1626797 | 81906.8 |
| methylmalonyl-coa mutase | SAMN04244553_1713 | Not Available | Negative | 1626797 - 1628686 | 65092.0 |
| uncharacterized membrane protein ydjx, tvp38/tmem64 family, snare-associated domain | SAMN04244553_1714 | Not Available | Positive | 1628869 - 1629564 | 24319.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

