Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| probable f420-dependent oxidoreductase, rv3520c family | SAMN04244553_1682 | Not Available | Negative | 1594197 - 1595234 | 37300.3 |
| formiminotetrahydrofolate cyclodeaminase | SAMN04244553_1683 | Not Available | Positive | 1595367 - 1596026 | 22219.2 |
| hypothetical protein | SAMN04244553_1684 | Not Available | Positive | 1596166 - 1597080 | 33094.8 |
| pyridoxamine 5'-phosphate oxidase family protein | SAMN04244553_1685 | Not Available | Positive | 1597181 - 1597597 | 15150.2 |
| lipoprotein-anchoring transpeptidase erfk/srfk | SAMN04244553_1686 | Not Available | Positive | 1597759 - 1598511 | 26704.5 |
| hypothetical protein | SAMN04244553_1687 | Not Available | Positive | 1598649 - 1599440 | 28175.0 |
| methylenetetrahydrofolate dehydrogenase (nadp+) / methenyltetrahydrofolate cyclohydrolase | SAMN04244553_1688 | Not Available | Negative | 1599592 - 1600530 | 31874.3 |
| duf218 domain-containing protein | SAMN04244553_1689 | Not Available | Positive | 1600672 - 1601544 | 30337.4 |
| release factor glutamine methyltransferase | SAMN04244553_1690 | Not Available | Positive | 1601776 - 1602576 | 27771.1 |
| short-chain dehydrogenase | SAMN04244553_1691 | Not Available | Negative | 1602802 - 1603632 | 29966.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

