Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_1672 | Not Available | Negative | 1586837 - 1587748 | 31379.5 |
| excreted virulence factor espc, type vii esx diderm | SAMN04244553_1673 | Not Available | Negative | 1587761 - 1588087 | 12035.1 |
| predicted unusual protein kinase regulating ubiquinone biosynthesis, aarf/abc1/ubib family | SAMN04244553_1674 | Not Available | Negative | 1588257 - 1589555 | 46349.4 |
| hypothetical protein | SAMN04244553_1675 | Not Available | Negative | 1589572 - 1589742 | 5511.75 |
| hypothetical protein | SAMN04244553_1676 | Not Available | Positive | 1590163 - 1590867 | 25862.8 |
| uncharacterized protein, contains gyd domain | SAMN04244553_1677 | Not Available | Negative | 1590893 - 1591216 | 11272.2 |
| uncharacterized membrane protein | SAMN04244553_1678 | Not Available | Negative | 1591358 - 1591864 | 17131.8 |
| cupin domain protein | SAMN04244553_1679 | Not Available | Positive | 1592362 - 1592727 | 13530.9 |
| hypothetical protein | SAMN04244553_1680 | Not Available | Negative | 1592743 - 1593381 | 22276.3 |
| anti-anti-sigma factor | SAMN04244553_1681 | Not Available | Positive | 1593743 - 1594093 | 11660.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

