Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-binding zinc finger cdgsh type | SAMN04244553_0269 | Not Available | Positive | 66223 - 66432 | 7861.35 |
| pyruvate dehydrogenase (quinone) | SAMN04244553_0270 | Not Available | Positive | 66471 - 68258 | 65025.6 |
| hypothetical protein | SAMN04244553_0271 | Not Available | Positive | 68262 - 69101 | 29185.7 |
| rna polymerase sigma-b factor | SAMN04244553_0272 | Not Available | Positive | 69222 - 70055 | 31118.0 |
| lipoprotein | SAMN04244553_0273 | Not Available | Negative | 70076 - 70669 | 20335.8 |
| hypothetical protein | SAMN04244553_0274 | Not Available | Positive | 71010 - 71462 | 15987.9 |
| monovalent cation:h+ antiporter-2, cpa2 family | SAMN04244553_0275 | Not Available | Negative | 71500 - 72681 | 40637.8 |
| trka domain protein | SAMN04244553_0276 | Not Available | Negative | 72685 - 73164 | 16899.3 |
| transcriptional regulator, tetr family | SAMN04244553_0277 | Not Available | Negative | 73237 - 73899 | 23601.1 |
| triacylglycerol esterase/lipase esta, alpha/beta hydrolase fold | SAMN04244553_0278 | Not Available | Positive | 74016 - 75203 | 41539.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

