Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04244553_1662 | Not Available | Positive | 1575037 - 1575831 | 28796.7 |
| cytochrome bd-i ubiquinol oxidase subunit 2 apoprotein | SAMN04244553_1663 | Not Available | Negative | 1575855 - 1576874 | 35437.5 |
| cytochrome bd-i ubiquinol oxidase subunit 1 apoprotein | SAMN04244553_1664 | Not Available | Negative | 1576878 - 1578296 | 51050.1 |
| d-amino-acid dehydrogenase | SAMN04244553_1665 | Not Available | Positive | 1578624 - 1579853 | 44064.1 |
| membrane dipeptidase | SAMN04244553_1666 | Not Available | Positive | 1579884 - 1580885 | 35955.1 |
| dna helicase iv | SAMN04244553_1667 | Not Available | Negative | 1580904 - 1583099 | 80753.5 |
| udp:flavonoid glycosyltransferase yjic, ydhe family | SAMN04244553_1668 | Not Available | Negative | 1583138 - 1584385 | 43094.2 |
| ribd c-terminal domain-containing protein | SAMN04244553_1669 | Not Available | Negative | 1584570 - 1585214 | 24394.4 |
| transcriptional regulator, hxlr family | SAMN04244553_1670 | Not Available | Positive | 1585274 - 1585798 | 18770.6 |
| hypothetical protein | SAMN04244553_1671 | Not Available | Negative | 1585946 - 1586809 | 30973.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

