Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarase, class i, homodimeric | SAMN04244553_1642 | Not Available | Negative | 1554606 - 1556282 | 61256.1 |
| dna-binding transcriptional regulator, marr family | SAMN04244553_1643 | Not Available | Positive | 1556611 - 1557078 | 17493.7 |
| l-lactate dehydrogenase (cytochrome) | SAMN04244553_1644 | Not Available | Negative | 1557141 - 1558349 | 42516.1 |
| creatinine amidohydrolase | SAMN04244553_1645 | Not Available | Negative | 1558346 - 1559200 | 30060.3 |
| transcriptional regulator, tetr family | SAMN04244553_1646 | Not Available | Positive | 1559205 - 1559732 | 19375.0 |
| rsbt co-antagonist protein rsbr | SAMN04244553_1647 | Not Available | Positive | 1559872 - 1560762 | 32760.3 |
| rsbt antagonist protein rsbs | SAMN04244553_1648 | Not Available | Positive | 1560776 - 1561165 | 14356.3 |
| serine/threonine-protein kinase rsbt | SAMN04244553_1649 | Not Available | Positive | 1561149 - 1561568 | 14763.8 |
| stage ii sporulation protein e (spoiie) | SAMN04244553_1650 | Not Available | Positive | 1561561 - 1562196 | 21856.1 |
| pas domain s-box-containing protein | SAMN04244553_1651 | Not Available | Positive | 1562246 - 1564540 | 81734.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

