Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_1632 | Not Available | Negative | 1541359 - 1541706 | 12276.3 |
| hypothetical protein | SAMN04244553_1633 | Not Available | Positive | 1541977 - 1543170 | 44348.5 |
| tigr02677 family protein | SAMN04244553_1634 | Not Available | Positive | 1543277 - 1545148 | 66774.1 |
| tigr02678 family protein | SAMN04244553_1635 | Not Available | Positive | 1545145 - 1546551 | 50887.5 |
| tigr02680 family protein | SAMN04244553_1636 | Not Available | Positive | 1546554 - 1550762 | 151954.0 |
| sugar phosphate permease | SAMN04244553_1637 | Not Available | Positive | 1550774 - 1552126 | 47132.5 |
| uncharacterized protein yuze | SAMN04244553_1638 | Not Available | Positive | 1552222 - 1552449 | 7813.24 |
| d-alanyl-d-alanine carboxypeptidase | SAMN04244553_1639 | Not Available | Negative | 1552529 - 1553047 | 18117.1 |
| hypothetical protein | SAMN04244553_1640 | Not Available | Negative | 1553716 - 1553904 | 6872.19 |
| hypothetical protein | SAMN04244553_1641 | Not Available | Negative | 1554047 - 1554442 | 14339.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

