Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsenate reductase | SAMN04244553_1611 | Not Available | Negative | 1515942 - 1516310 | 13523.9 |
| dolichyl-phosphate-mannose-protein mannosyltransferase | SAMN04244553_1612 | Not Available | Negative | 1516333 - 1517868 | 55142.6 |
| bile acid:na+ symporter, bass family | SAMN04244553_1613 | Not Available | Negative | 1518007 - 1518885 | 30218.9 |
| pucr c-terminal helix-turn-helix domain-containing protein | SAMN04244553_1614 | Not Available | Negative | 1518970 - 1520112 | 40880.6 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | SAMN04244553_1615 | Not Available | Positive | 1520255 - 1521799 | 54607.4 |
| proteasome-associated atpase | SAMN04244553_1617 | Not Available | Negative | 1522448 - 1524208 | 65132.1 |
| hypothetical protein | SAMN04244553_1618 | Not Available | Positive | 1524390 - 1524920 | 17591.7 |
| trna (adenine-58-n(1)-) methyltransferase | SAMN04244553_1619 | Not Available | Negative | 1524997 - 1525788 | 28637.3 |
| putative recb family exonuclease | SAMN04244553_1620 | Not Available | Positive | 1525799 - 1526821 | 37091.2 |
| conserved hypothetical integral membrane protein | SAMN04244553_1621 | Not Available | Negative | 1526887 - 1528053 | 40720.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

