Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix domain-containing protein | SAMN04244553_1601 | Not Available | Positive | 1505776 - 1506312 | 20052.5 |
| long-chain acyl-coa synthetase (amp-forming) | SAMN04244553_1602 | Not Available | Positive | 1506446 - 1508284 | 65233.2 |
| pucr c-terminal helix-turn-helix domain-containing protein | SAMN04244553_1603 | Not Available | Positive | 1508325 - 1509518 | 42845.3 |
| hypothetical protein | SAMN04244553_1604 | Not Available | Positive | 1509677 - 1511734 | 73846.8 |
| arac-type dna-binding protein | SAMN04244553_1605 | Not Available | Positive | 1511922 - 1512698 | 27178.4 |
| hypothetical protein | SAMN04244553_1606 | Not Available | Positive | 1512727 - 1513023 | 10091.4 |
| yidc/oxa1 family membrane protein insertase | SAMN04244553_1607 | Not Available | Positive | 1513126 - 1514013 | 32389.6 |
| deazaflavin-dependent oxidoreductase, nitroreductase family | SAMN04244553_1608 | Not Available | Negative | 1514021 - 1514401 | 13855.8 |
| isopentenyldiphosphate isomerase | SAMN04244553_1609 | Not Available | Positive | 1514453 - 1514983 | 19605.1 |
| tigr00266 family protein | SAMN04244553_1610 | Not Available | Negative | 1515183 - 1515863 | 23616.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

