Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proteasome accessory factor c | SAMN04244553_1591 | Not Available | Negative | 1496001 - 1496981 | 35181.1 |
| proteasome accessory factor b | SAMN04244553_1592 | Not Available | Negative | 1496978 - 1497994 | 36940.1 |
| uncharacterized protein, mth1187 family | SAMN04244553_1593 | Not Available | Positive | 1498062 - 1498358 | 10373.6 |
| proteasome accessory factor a | SAMN04244553_1594 | Not Available | Negative | 1498444 - 1499787 | 50626.0 |
| proteasome alpha subunit | SAMN04244553_1595 | Not Available | Negative | 1500133 - 1500903 | 27970.3 |
| proteasome beta subunit | SAMN04244553_1596 | Not Available | Negative | 1500900 - 1501748 | 29717.2 |
| prokaryotic ubiquitin-like protein pup | SAMN04244553_1597 | Not Available | Negative | 1501763 - 1501957 | 7026.74 |
| proteasome accessory factor a | SAMN04244553_1598 | Not Available | Negative | 1502133 - 1503632 | 55123.6 |
| uncharacterized protein | SAMN04244553_1599 | Not Available | Positive | 1503725 - 1504930 | 43833.0 |
| hypothetical protein | SAMN04244553_1600 | Not Available | Positive | 1505066 - 1505779 | 26446.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

