Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| precorrin-6y c5,15-methyltransferase (decarboxylating) | SAMN04244553_1581 | Not Available | Negative | 1484813 - 1486060 | 43184.9 |
| short-chain dehydrogenase | SAMN04244553_1582 | Not Available | Negative | 1486083 - 1486838 | 26215.9 |
| ppox class probable f420-dependent enzyme | SAMN04244553_1583 | Not Available | Positive | 1486945 - 1487343 | 14235.0 |
| xaa-pro aminopeptidase | SAMN04244553_1584 | Not Available | Negative | 1487360 - 1488559 | 41782.8 |
| 5'-3' exonuclease | SAMN04244553_1585 | Not Available | Positive | 1488637 - 1489602 | 33692.0 |
| protein of unknown function | SAMN04244553_1586 | Not Available | Negative | 1489825 - 1490544 | 25706.5 |
| atp-dependent rna helicase hely | SAMN04244553_1587 | Not Available | Negative | 1490704 - 1493400 | 99011.3 |
| sec-independent protein translocase protein tatc | SAMN04244553_1588 | Not Available | Negative | 1493404 - 1494351 | 34332.3 |
| sec-independent protein translocase protein tata | SAMN04244553_1589 | Not Available | Negative | 1494590 - 1494847 | 9070.96 |
| 2-dehydropantoate 2-reductase | SAMN04244553_1590 | Not Available | Negative | 1494950 - 1495981 | 36509.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

