Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phnb protein | SAMN04244553_1530 | Not Available | Negative | 1422109 - 1422522 | 14779.4 |
| adp-heptose:lps heptosyltransferase | SAMN04244553_1531 | Not Available | Positive | 1422720 - 1423694 | 34851.2 |
| helix-turn-helix domain-containing protein | SAMN04244553_1532 | Not Available | Negative | 1423699 - 1424016 | 11358.6 |
| murein dd-endopeptidase mepm and murein hydrolase activator nlpd, contain lysm domain | SAMN04244553_1533 | Not Available | Positive | 1424200 - 1424898 | 23879.9 |
| hypothetical protein | SAMN04244553_1534 | Not Available | Positive | 1425122 - 1426132 | 36483.5 |
| hypothetical protein | SAMN04244553_1535 | Not Available | Negative | 1426205 - 1426531 | 12017.2 |
| rna polymerase-binding protein | SAMN04244553_1536 | Not Available | Positive | 1426794 - 1427129 | 13046.5 |
| abc-2 type transport system permease protein | SAMN04244553_1537 | Not Available | Negative | 1427209 - 1428102 | 31983.5 |
| abc-2 type transport system atp-binding protein | SAMN04244553_1538 | Not Available | Negative | 1428164 - 1429156 | 34824.8 |
| amino acid adenylation domain-containing protein | SAMN04244553_1539 | Not Available | Negative | 1429173 - 1442822 | 489574.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

