Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| osmoprotectant transport system substrate-binding protein | SAMN04244553_1520 | Not Available | Positive | 1409768 - 1410733 | 34737.1 |
| hypothetical protein | SAMN04244553_1521 | Not Available | Negative | 1410808 - 1411374 | 19863.8 |
| alkane 1-monooxygenase | SAMN04244553_1522 | Not Available | Negative | 1412180 - 1413397 | 45782.3 |
| secretory lipase | SAMN04244553_1523 | Not Available | Negative | 1413932 - 1415242 | 44978.9 |
| atp-dependent clp protease proteolytic subunit clpp | SAMN04244553_1524 | Not Available | Positive | 1415516 - 1416121 | 21810.1 |
| atp-dependent clp protease, protease subunit | SAMN04244553_1525 | Not Available | Positive | 1416195 - 1416788 | 21340.7 |
| helix-turn-helix domain-containing protein | SAMN04244553_1526 | Not Available | Negative | 1416794 - 1417162 | 13434.0 |
| methyltransferase domain-containing protein | SAMN04244553_1527 | Not Available | Positive | 1417294 - 1417953 | 23652.8 |
| serine/threonine-protein kinase pknk | SAMN04244553_1528 | Not Available | Positive | 1418075 - 1421404 | 121323.0 |
| uncharacterized membrane protein hded, duf308 family | SAMN04244553_1529 | Not Available | Negative | 1421418 - 1422002 | 20375.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

