Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-carbamoylputrescine amidase | SAMN04244553_1510 | Not Available | Positive | 1398016 - 1398864 | 31811.2 |
| dihydropyrimidinase | SAMN04244553_1511 | Not Available | Positive | 1398878 - 1400299 | 51332.9 |
| f420-dependent oxidoreductase, cps_4043 family | SAMN04244553_1512 | Not Available | Positive | 1400309 - 1401334 | 37401.6 |
| taurine---2-oxoglutarate transaminase | SAMN04244553_1513 | Not Available | Positive | 1401331 - 1402659 | 47427.6 |
| malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase | SAMN04244553_1514 | Not Available | Positive | 1402656 - 1404164 | 52941.9 |
| nucleobase:cation symporter-1, ncs1 family | SAMN04244553_1515 | Not Available | Positive | 1404191 - 1405648 | 51656.5 |
| acetyl esterase | SAMN04244553_1516 | Not Available | Positive | 1405926 - 1407044 | 39646.4 |
| osmoprotectant transport system permease protein | SAMN04244553_1517 | Not Available | Positive | 1407246 - 1407821 | 19342.7 |
| osmoprotectant transport system atp-binding protein | SAMN04244553_1518 | Not Available | Positive | 1407814 - 1409001 | 41809.1 |
| osmoprotectant transport system permease protein | SAMN04244553_1519 | Not Available | Positive | 1408998 - 1409771 | 27066.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

