Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04244553_1500 | Not Available | Positive | 1364592 - 1365347 | 28175.3 |
| lsr2 protein | SAMN04244553_1501 | Not Available | Negative | 1365472 - 1365810 | 12294.5 |
| non-ribosomal peptide synthase domain tigr01720/amino acid adenylation domain-containing protein | SAMN04244553_1502 | Not Available | Positive | 1366990 - 1391427 | 876603.0 |
| methyltransferase, fkbm family | SAMN04244553_1503 | Not Available | Positive | 1391421 - 1392212 | 29156.8 |
| drug resistance transporter, emrb/qaca subfamily | SAMN04244553_1504 | Not Available | Negative | 1392224 - 1393648 | 47501.9 |
| dna-binding transcriptional regulator, lysr family | SAMN04244553_1505 | Not Available | Positive | 1393770 - 1394669 | 32700.5 |
| hypothetical protein | SAMN04244553_1506 | Not Available | Positive | 1394707 - 1395345 | 23655.9 |
| transcriptional regulator, tetr family | SAMN04244553_1507 | Not Available | Negative | 1395438 - 1395980 | 20133.0 |
| hypothetical protein | SAMN04244553_1508 | Not Available | Positive | 1396075 - 1396524 | 15698.2 |
| dna-binding transcriptional regulator, mocr family, contains an aminotransferase domain | SAMN04244553_1509 | Not Available | Negative | 1396534 - 1397910 | 48865.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

