Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN04244553_1479 | Not Available | Negative | 1344285 - 1345169 | 31214.5 |
| l-fuculose-phosphate aldolase | SAMN04244553_1480 | Not Available | Negative | 1345166 - 1345966 | 28970.7 |
| transcriptional regulator, xre family with cupin sensor | SAMN04244553_1481 | Not Available | Positive | 1346068 - 1346610 | 19636.2 |
| alcohol dehydrogenase, propanol-preferring | SAMN04244553_1482 | Not Available | Negative | 1346639 - 1347655 | 35770.7 |
| pyridoxamine 5'-phosphate oxidase | SAMN04244553_1483 | Not Available | Positive | 1347889 - 1348338 | 16357.5 |
| tigr03083 family protein | SAMN04244553_1484 | Not Available | Negative | 1348344 - 1348973 | 22549.8 |
| nucleotide-binding universal stress protein, uspa family | SAMN04244553_1485 | Not Available | Positive | 1349274 - 1350194 | 32350.4 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04244553_1486 | Not Available | Negative | 1350222 - 1350971 | 25556.5 |
| atp-binding cassette, subfamily b | SAMN04244553_1487 | Not Available | Negative | 1350991 - 1352706 | 61289.6 |
| atp-binding cassette, subfamily b | SAMN04244553_1488 | Not Available | Negative | 1352703 - 1354511 | 64179.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

